Grupul nostru publică lucrări care prezintă noi metodologii, descriu rezultatele studiilor care utilizează software-ul nostru și revizuiesc subiectele actuale din domeniul Bioinformaticii. Derulați în jos sau faceți clic aici pentru o listă completă a lucrărilor produse de laboratorul nostru. Din 2013, scriem postări pe blog care rezumă noi lucrări de cercetare și articole de recenzie:
LaPierre, Nathan; Mangul, Serghei; Alser, Mohammed; Mandric, Igor Wu, Nicholas C; Koslicki, David; Eskin, Eleazar
BMC Genomics, 20 (Suppl 5), pp. 423, 2019, ISSN: 1471-2164 .
Mangul, Serghei; Martin, Lana S; Eskin, Eleazar; Blekhman, Ran
Genomul Biol, 20 (1), pp. 47, 2019, ISSN: 1474-760X .
Duong, Dat; Ahmad, Wasi Uddin; Eskin, Eleazar; Chang, Kai-Wei W; Li, Jingyi Jessica
J Comput Biol, 26 (1), pp. 38-52, 2019, ISSN: 1557-8666 .
Mangul, Serghei; Martin, Lana S; Langmead, Ben; Sanchez-Galan, Javier E; Thomas, Ian; Hormozdiari, Fereydoun; Pevzner, Pavel; Eskin, Eleazar
Nat Biotechnol, 37 (3), pp. 324-326, 2019, ISSN: 1546-1696 .
Mangul, Serghei; Martin, Lana S; Hill, Brian L; Lam, Angela Ka-Mei; Distler, Margaret G; Zelikovsky, Alex Eskin, Eleazar; Flint, Jonathan
Nat Commun, 10 (1), pp. 1393, 2019, ISSN: 2041-1723 .
Mangul, Serghei; Mosqueiro, Thiago; Abdill, Richard J; Duong, Dat; Mitchell, Keith; Sarwal, Varuni; Hill, Brian; Brito, Jaqueline; Littman, Russell Jared; Statz, Benjamin; Lam, Angela Ka-Mei; Dayama, Gargi; Grieneisen, Laura; Martin, Lana S; Flint, Jonathan; Eskin, Eleazar; Blekhman, Ran
PLoS Biol, 17 (6), pp. e3000333, 2019, ISSN: 1545-7885 .
Gai, Lisa; Eskin, Eleazar
Bioinformatică, 34 (13), pp. i467-i474, 2018, ISSN: 1367-4811 .
Hormozdiari, Farhad I; Jung, Junghyun; Eskin, Eleazar; Joo, Jong Wha J
bioRxiv, pp. 498360, 2018 .
Kennedy, Elizabeth M; Goehring, George N; Nichols, Michael H; Robins, Chloe; Mehta, Divya; Klengel, Torsten; Eskin, Eleazar; Smith, Alicia K; Conneely, Karen N
BMC Genomics, 19 (1), pp. 476, 2018, ISSN: 1471-2164 .
Genele 13udotk pentru a explora modul în care metilarea ADN-ului interacționează cu expresia genică, în întregul genom. REZULTATE: Am folosit un cadru de model mixt liniar pentru a evalua corelația metilării ADN la
400udotk CpGs cu expresia genei se modifică la
Transcrieri 13udotk în două seturi de date independente din celulele sanguine umane. Dintre CpG la care metilarea se asociază semnificativ cu transcripția (eCpGs),> 50% sunt distale (> 50udotkb) sau trans (diferit cromozom) de gena corelată. Multe perechi de transcripții eCpG sunt consistente între studii și
90% dintre eCpG-urile vecine se asociază cu aceeași genă, în cadrul studiilor. Am descoperit că potențatorii (P 50% sunt distali (> 50udotkb) sau trans (diferiți cromozomi) față de gena corelată. Multe perechi de transcripții eCpG sunt consistente între studii și
90% dintre eCpG-urile vecine se asociază cu aceeași genă, în cadrul studiilor. Am găsit că potențatori (P Journal Article
Genetică, 2018, ISSN: 1943-2631 .
Mangul, Serghei; Yang, Harry Taegyun; Strauli, Nicolas; Gruhl, Franziska; Porath, Hagit T; Hsieh, Kevin; Chen, Linus; Daley, Timothy; Christenson, Stephanie; Wesolowska-Andersen, Agata; Spreafico, Roberto; Rios, Cydney; Eng, Celeste; Smith, Andrew D; Hernandez, Ryan D; Ophoff, Roel A; Santana, Jose Rodriguez; Levanon, Erez Y; Woodruff, Prescott G; Burchard, Esteban; Seibold, Max A; Shifman, Sagiv; Eskin, Eleazar; Zaitlen, Noah
Genomul Biol, 19 (1), pp. 36, 2018, ISSN: 1474-760X .
Rahmani, Elior; Schweiger, Regev; Shenhav, Liat; Wingert, Theodora; Hofer, Ira; Gabel, Eilon; Eskin, Eleazar; Halperin, Eran
Genomul Biol, 19 (1), pp. 141, 2018, ISSN: 1474-760X .
Wu, Yue; Hormozdiari, Farhad; Joo, Jong Wha J; Eskin, Eleazar
J Comput Biol, 2018, ISSN: 1557-8666 .
Mangul, Serghei; Martin, Lana S; Eskin, Eleazar
Nat Biotechnol, 36 (4), pp. 369-371, 2018, ISSN: 1546-1696 .
Gamazon, Eric R; Segrè, Ayellet V; van de Bunt, Martijn; Wen, Xiaoquan; Xi, Hualin S; Hormozdiari, Farhad; Ongen, Halit; Konkashbaev, Anuar; Derks, Eske M; Aguet, François; Quan, Jie; Nicolae, Dan L; Eskin, Eleazar; Kellis, Manolis; Getz, Gad; McCarthy, Mark I; Dermitzakis, Emmanouil T; Cox, Nancy J; Ardlie, Kristin G
Nat Genet, 50 (7), pp. 956-967, 2018, ISSN: 1546-1718 .
Hormozdiari, Farhad; Gazal, Steven; van de Geijn, Bryce; Finucane, Hilary K; Ju, Chelsea J-T; Loh, Po-Ru R; Schoech, Armin; Reshef, Yakir; Liu, Xuanyao; O'Connor, Luke; Gusev, Alexandru; Eskin, Eleazar; Preț, Alkes L
Nat Genet, 50 (7), pp. 1041-1047, 2018, ISSN: 1546-1718 .
Sul, Jae Hoon; Martin, Lana S; Eskin, Eleazar
PLoS Genet, 14 (12), pp. e1007309, 2018, ISSN: 1553-7404 .
Loohuis, Loes Olde M; Mangul, Serghei; Ori, Anil P S; Jospin, Guillaume; Koslicki, David; Yang, Harry Taegyun; Wu, Timothy; Box, Marco P; Lomen-Hoerth, Catherine; Wiedau-Pazos, Martina; Cantor, Rita M; de Vos, Willem M; Kahn, René S; Eskin, Eleazar; Ophoff, Roel A.
Psihiatrie Transl, 8 (1), pp. 96, 2018, ISSN: 2158-3188 .
Robert Brown Gleb Kichaev, Nicholas Mancuso James Boocock; Pasaniuc, Bogdan
Bioinformatică, pp. btx142, 2017 .
Ritchie, Marylyn D; Davis, Joe R; Aschard, Hugues; Bătălia, Alexis; Conti, David; Du, Mengmeng; Eskin, Eleazar; Fallin, Daniele M; Hsu, Li; Kraft, Peter; Moore, Jason H; Pierce, Brandon L; Bien, Stephanie A; Thomas, Duncan C; Wei, Peng; Montgomery, Stephen B.
Am J Epidemiol, 186 (7), pp. 771-777, 2017, ISSN: 1476-6256 .
Hormozdiari, Farhad; Zhu, Anthony; Kichaev, Gleb; Ju, Chelsea J-T; Segrè, Ayellet V; Joo, Jong Wha J; Câștigat, Hyejung; Sankararaman, Sriram; Pasaniuc, Bogdan Shifman, Sagiv; Eskin, Eleazar
Am J Hum Genet, 100 (5), pp. 789-802, 2017, ISSN: 1537-6605 .
Duong, Dat; Gai, Lisa; Snir, Sagi; Kang, Eun Yong; Han, Buhm; Sul, Jae Hoon; Eskin, Eleazar
Bioinformatică, 33 (14), pp. i67-i74, 2017, ISSN: 1367-4811 .
Lee, C H; Eskin, E.; Han, B
Bioinformatică, 33 (14), pp. i379-i388, 2017, ISSN: 1367-4811 .
Lozano, Jose A; Hormozdiari, Farhad; Joo, Jong Wha; Han, Buhm; Eskin, Eleazar
bioRxiv, pp. 208199, 2017 .
Park, Danny S; Eskin, Itamar; Kang, Eun Yong; Gamazon, Eric R; Eng, Celeste; Gignoux, Christopher R; Galanter, Joshua M; Burchard, Esteban; Voi, Chun J; Aschard, Hugues; Eskin, Eleazar; Halperin, Eran; Zaitlen, Noah
Genet Epidemiol, 2017, ISSN: 1098-2272 .
Genetica, 205 (3), pp. 1041-1047, 2017, ISSN: 1943-2631 .
Mangul, Serghei; Yang, Harry Taegyun; Hormozdiari, Farhad; Dainis, Alex; Tseng, Elizabeth; Ashley, Euan A; Zelikovsky, Alex Eskin, Eleazar
IEEE Trans Nanobioscience, 16 (2), pp. 108-115, 2017, ISSN: 1558-2639 .
El, Dan; Wang, Zhanyong; Parida, Laxmi; Eskin, Eleazar
IEEE/ACM Trans Comput Biol Bioinform, 2017, ISSN: 1557-9964 .
Buckley, Matthew T; Racimo, Fernando; Allentoft, Morten E; Jensen, Majken K; Jonsson, Anna; Huang, Hongyan; Hormozdiari, Farhad; Sikora, Martin; Marnetto, David; Eskin, Eleazar; Jørgensen, Marit E; Grarup, Niels; Pedersen, Oluf; Hansen, Torben; Kraft, Peter; Willerslev, Eske; Nielsen, Rasmus
Mol Biol Evol, 2017, ISSN: 1537-1719 .
Jasinska, Anna J.; Zelaya, Ivette; Service, Susan K; Peterson, Christine B; Cantor, Rita M; Choi, Oi-Wa W; DeYoung, Joseph; Eskin, Eleazar; Fairbanks, Lynn A; Frici, Scott; Furterer, Allison E; Huang, Yu S; Ramensky, Vasily; Schmitt, Christopher A; Svardal, Hannes; Jorgensen, Matthew J; Kaplan, Jay R; Villar, Diego; Aken, Bronwen L; Flicek, Paul; Nag, Rishi; Wong, Emily S; Blangero, John; Dyer, Thomas D; Bogomolov, Marina Benjamini, Yoav; Weinstock, George M; Dewar, Ken; Sabatti, Chiara; Wilson, Richard K; Jentsch, David J; Warren, Wesley; Coppola, Giovanni; Woods, Roger P; Freimer, Nelson B.
Nat Genet, 49 (12), pp. 1714-1721, 2017, ISSN: 1546-1718 .
Rahmani, Elior; Zaitlen, Noe; Baran, Yael; Eng, Celeste; Hu, Donglei; Galanter, Iosua; Oh, Sam; Burchard, Esteban G; Eskin, Eleazar; Zou, James; Halperin, Eran
Metode Nat, 14 (3), pp. 218-219, 2017, ISSN: 1548-7105 .
Crawford, Nicholas G; Kelly, Derek E; Hansen, Matthew E B; Beltrame, Marcia H; Fan, Shaohua; Bowman, Shanna L; Jewett, Ethan; Ranciaro, Alessia; Thompson, Simon; Iată, Yancy; Pfeifer, Susanne P; Jensen, Jeffrey D; Campbell, Michael C; Beggs, William; Hormozdiari, Farhad; Mpoloka, Sununguko Wata; Mokone, Gaonyadiwe George; Nyambo, Thomas; Meskel, Dawit Wolde; Belay, Gurja; Haut, Jake; Rothschild, Harriet; Zon, Leonard; Zhou, Yi; Kovacs, Michael A; Xu, Mai; Zhang, Tongwu; Episcop, Kevin; Sinclair, Jason; Rivas, Cecilia; Elliot, Eugene; Choi, Jiyeon; Li, Shengchao A; Hicks, Belynda; Burgess, Shawn; Abnet, creștin; Watkins-Chow, Dawn E; Oceana, Elena; Song, Yun S; Eskin, Eleazar; Brown, Kevin M; Marks, Michael S; Loftus, Stacie K; Pavan, William J.; Yeager, Meredith; Chanock, Stephen; Tishkoff, Sarah A
Știință, 358 (6365), 2017, ISSN: 1095-9203 .
Mangul, Serghei; Martin, Lana S; Hoffmann, Alexander; Pellegrini, Matteo; Eskin, Eleazar
Trends Biotechnol, 2017, ISSN: 1879-3096 .
Mangul, Serghei; Loohuis, Loes Olde M; Ori, Anil; Jospin, Guillaume; Koslicki, David; Yang, Harry Taegyun; Wu, Timothy; Box, Marco P; Lomen-Hoerth, Catherine; Wiedau-Pazos, Martina; Cantor, Rita; de Vos, Willem M; Kahn, Rene S; Eskin, Eleazar; Ophoff, Roel A.
BioRxiv, (057570), 2016 .
Mangul, Serghei; Yang, Harry Taegyun; Strauli, Nicolas; Gruhl, Franziska; Daley, Timothy; Christenson, Stephanie; Andersen, Agata Wesolowska; Spreafico, Roberto; Rios, Cydney; Eng, Celeste; Smith, Andrew D; Hernandez, Ryan D; Ophoff, Roel A; Santana, Jose Rodriguez; Woodruff, Prescott G; Burchard, Esteban; Seibold, Max A; Shifman, Sagiv; Eskin, Eleazar; Zaitlen, Noah
Han, Buhm; Duong, Dat; Sul, Jae Hoon; de Bakker, Paul I W; Eskin, Eleazar; Raychaudhuri, Soumya
Hum Mol Genet, 2016, ISSN: 1460-2083 .
Sul, Jae Hoon; Bilow, Michael; Yang, Wen-Yun Y; Kostem, Emrah; Furlotte, Nick; El, Dan; Eskin, Eleazar
PLoS Genet, 12 (3), pp. e1005849, 2016, ISSN: 1553-7404 .
Joo, Jong Wha J; Hormozdiari, Farhad; Han, Buhm; Eskin, Eleazar
Genomul Biol, 17 (1), pp. 62, 2016, ISSN: 1474-760X .
Lucy, Aldons J; Seldin, Marcus; Allayee, Hooman; Bennett, Brian J; Civelek, Mete; Davis, Richard C; Eskin, Eleazar; Farber, Charles; Hui, Simon T; Mehrabian, Margarete; Norheim, Frode; Pan, Calvin; Parks, Brian; Rau, Christoph; Smith, Desmond J; Vallim, Thomas; Wang, Yibin; Wang, Jessica
J Lipid Res, 2016, ISSN: 1539-7262 .
Mangul, Serghei; Yang, Harry; Hormozdiari, Farhad; Tseng, Elizabeth; Zelikovsky, Alex Eskin, Eleazar
Cercetări și aplicații în bioinformatică, pp. 80-92, Editura Springer International, 2016 .
Hormozdiari, Farhad; Kang, Eun Yong; Bilow, Michael; Ben-David, Eyal; Vulpe, Chris; McLachlan, Stela; Lucy, Aldons J; Han, Buhm; Eskin, Eleazar
Am J Hum Genet, 99 (1), pp. 89-103, 2016, ISSN: 1537-6605 .
Duong, Dat; Zou, Jennifer; Hormozdiari, Farhad; Sul, Jae Hoon; Ernst, Jason; Han, Buhm; Eskin, Eleazar
Bioinformatică, 32 (12), pp. i156-i163, 2016, ISSN: 1367-4811 .
Kang, Eun Yong; Park, Yurang; Li, Xiao; Segrè, Ayellet V; Han, Buhm; Eskin, Eleazar
G3 (Bethesda), 6 (7), pp. 1793-8, 2016, ISSN: 2160-1836 .
Câștigat, Hyejung; de la Torre-Ubieta, Luis; Stein, Jason L; Parikshak, Neelroop N; Huang, Jerry; Opland, Carly K; Gandal, Michael J; Sutton, Gavin J; Hormozdiari, Farhad; Lu, Daning; Lee, Changhoon; Eskin, Eleazar; Voineagu, Irina; Ernst, Jason; Geschwind, Daniel H
Natura, 538 (7626), pp. 523-527, 2016, ISSN: 1476-4687 .
Kang, Eun Yong; Martin, Lisa; Mangul, Serghei; Isvilanonda, Warin; Zou, Jennifer; Ben-David, Eyal; Han, Buhm; Lucy, Aldons J; Shifman, Sagiv; Eskin, Eleazar
Genetică, 2016, ISSN: 1943-2631 .
Artyomenko, Alexander; Wu, Nicholas C; Mangul, Serghei; Eskin, Eleazar; Soare, Ren; Zelikovsky, Alex
Research in Computational Molecular Biology, pp. 164-175, Editura Springer International, 2016 .
Hormozdiari, Farhad; van de Bunt, Martijn; Segrè, Ayellet V; Li, Xiao; Joo, Jong Wha J; Bilow, Michael; Sul, Jae Hoon; Sankararaman, Sriram; Pasaniuc, Bogdan Eskin, Eleazar
Am J Hum Genet, 2016, ISSN: 1537-6605 .
Joo, Jong Wha J; Kang, Eun Yong; Org, Elin; Furlotte, Nick; Parks, Brian; Hormozdiari, Farhad; Lucy, Aldons J; Eskin, Eleazar
Genetica, 204 (4), pp. 1379-1390, 2016, ISSN: 1943-2631 .
Câștigat, Hyejung; de la Torre-Ubieta, Luis; Stein, Jason L; Parikshak, Neelroop N; Huang, Jerry; Opland, Carly K; Gandal, Michael J; Sutton, Gavin J; Hormozdiari, Farhad; Lu, Daning; Lee, Changhoon; Eskin, Eleazar; Voineagu, Irina; Ernst, Jason; Geschwind, Daniel H
Natura, 538 (7626), pp. 523-527, 2016, ISSN: 1476-4687 .
Artyomenko, Alexander; Wu, Nicholas C; Mangul, Serghei; Eskin, Eleazar; Soare, Ren; Zelikovsky, Alex
Research in Computational Molecular Biology, pp. 164-175, Editura Springer International, 2016 .